Linux
awk: How to remove the rest of a fasta header name after a specific character
This short post is about how to clean a fasta header and keep only the necessary.
seqtk: Extract a specific set of sequences from a multi-fasta file
This tutorial deals with one aspect of a fasta file handling.
awk: Extract sequence from a multiple-fasta file and return each sequence with the corresponding name
This post is about how to extract from a multiple fasta file each sequence with the corresponding header
awk: Prepare input file for RNA editing detection
This post deals with the formating of input file for RNA editing sites detection
Python: Find single-nucleotide polymorphism from aligned sequences
This short blog deal with the detection of SNPs from two aligned sequences